Hi there,
I'm currently conducting a transcriptomics study on Nicotiana benthamiana, and have reached a point where i would like to conduct...
14 results in 0.0028 seconds.
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GO enrichment, how to get GO mappings for non-native in GOseq
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How to proceed for Annotation and Characterization of novel miRNA
We have sequenced miRNA of bubaline/buffalo leukocytes. Some novel miRNAs have been obtained.
One example file has been attached.
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GO enrichment analysis for a non-model system
I have data from a few RNAseq experiments on a non-model eukaryote, in which I have assembled transcriptomes with Trinity and analyzed expression with... -
Directly analyze GO numbers
I want to perform a gene ontology analysis on a list of significant genes using the GO numbers directly and not the sequences/gene IDs.
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gene ontology terms second level
Hi everyone,
I am working with some proteomes and I did a multipfam2go annotation, so I have a file with multiples Gene Ontology IDs per protein.... -
Gene Ontology in non-model organisms
I have a list of differentially expressed genes from an RNA-Seq experiment in Xenopus laevis that I'm looking to functionally annotate with GO-terms....Last edited by nr23; 02-12-2014, 01:51 PM. -
Gene ontology enrichment analysis tool
Hi All,
I am working with microarray data. I have some genes of interest that I want to know the GO enriched terms. So far I have found... -
Gene Ontology analysis tools
Hi Everyone,
I desperately need your expertise advise on this
I have a assembled a genome de novo, and I would like to... -
GO database
Hi,
First of all sorry for lack of information!
I want to do GO analysis on my microarray data. I am going to use PIANO package... -
Conversion file .dat (Blast2GO) into GOA file
Hello everybody,
I have a old Gene Ontology file from Blast2GO (.dat) made by a previous collegue and I would like to convert it in a GOA... -
Pull out gene ontology annotation from Ensembl
Hi,
I was working on some scripts that uses Ensembl perl API to pull out newest gene build and associated annotations. However, I went... -
From Fasta get GO-terms
Hello friends,
I used to do GO annotation using Blast2GO but it strangely gave me 0 GO-terms to a 507 sequences dataset... it was really... -
HELP: GO analysis of non-natively supported organism using R package goseq
Hi,all
i am trying to perform GO analysis with goseq, but the organism in my work is not natively supported by the package and i am either not... -
ARGOT2: a new tool for function annotation
Hi all,
here in Padova we have developed a new tool for protein/gene annotation called ARGOT2 (the first version has been published on...
