Unconfigured Ad

Collapse
X
 
  • Time
  • Show
Clear All
new posts
  • Chuckytah
    Member
    • Mar 2011
    • 65

    #1

    From Fasta get GO-terms

    Hello friends,

    I used to do GO annotation using Blast2GO but it strangely gave me 0 GO-terms to a 507 sequences dataset... it was really strange... The blast went fine, but when I try the annotation it gives me no hits at all... I dunno if I made me clear.

    You know any other software to have GO-terms from fasta files?

    Thanks.
  • JackieBadger
    Senior Member
    • Mar 2009
    • 385

    #2
    did you change the type of blast search? GO annotations only work with BLASTx.... tBLASTx does not work

    Comment

    • Chuckytah
      Member
      • Mar 2011
      • 65

      #3
      Originally posted by JackieBadger View Post
      did you change the type of blast search? GO annotations only work with BLASTx.... tBLASTx does not work
      I really can't remember if I did any alteration in the parameters. lol but I already solve my problem in tab Tools there is an option that "Restore all original B2G properties", and now everything is okay.

      Comment

      Latest Articles

      Collapse

      • SEQadmin2
        16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
        by SEQadmin2





        NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification,...
        10-30-2026, 06:46 AM
      • SEQadmin2
        Multiomic Liquid Biopsy: What DNA/RNA Panels Reveal That DNA Alone Can’t
        by SEQadmin2



        Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?

        Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating
        ...
        10-14-2026, 09:55 AM

      ad_right_rmr

      Collapse

      News

      Collapse

      Topics Statistics Last Post
      Started by SEQadmin2, Yesterday, 07:59 AM
      0 responses
      16 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 11-05-2026, 09:25 AM
      0 responses
      32 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 11-03-2026, 11:54 AM
      0 responses
      47 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 10-28-2026, 09:57 AM
      0 responses
      172 views
      0 reactions
      Last Post SEQadmin2  
      Working...