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SEQadmin2 started a topic Giant Sunflower Genomes Advance the Case for Climate-Resilient Perennial Cropsin NewsGiant Sunflower Genomes Advance the Case for Climate-Resilient Perennial Crops
Researchers at the Land Institute and the HudsonAlpha Institute for Biotechnology have produced the first chromosome-scale, haplotype-phased genome assemblies...Last edited by SEQadmin2; Today, 11:00 AM. -
Recent Progress in Genome Assembly Technologies
After sequencing a genome, the next step is to assemble the millions or even billions of DNA fragments into a complete and continuous sequence. Given the size and complexity, like the ~3 billion bases in the human genome, constructing this sequence presents substantial challenges. This article reviews the current state of genome assembly, highlighting key technical obstacles, recent advancements in sequencing technologies and assembly tools, and emerging trends influencing the future... -
bcftools genome assembly doubt
Good morning, everyone!
I am using bcftools for genome assembly and extracting consensus sequences of viral genomes. Firstly, I noticed that...Last edited by felipe.iani; 05-20-2024, 05:48 AM. -
How to manually curate a specific region in a genome assembly?
Hello,
I have a PacBio HiFi assembly of 1.1 Gb from a heterozygous species. I have aligned this assembly against a reference genome which... -
Genome Assembly
I have Illumina sequenced paired-end reads of an arthropod genome. I already mapped my reads to the reference genome and generated a BAM file and a variant... -
Genome assembly and annotation tips sharing
De novo genome assembly has become an affordable and achievable method to solve biological problems. Following the recent Genome of Animal and Plants... -
Upcoming online UC Davis Bioinformatics Core workshops
Join us in July and August to explore genome assembly, mRNA-Seq analysis, and Single-Cell analysis! We’re excited to follow up our three recent successful... -
Summer School in Bioinformatics
Summer school in Bioinformatics: INTRODUCTION TO NGS data analysis
When: 7-11 September 2020
Where: Due to the COVID-19... -
Long-read Nanopore Sequencing course
GENOME ASSEMBLY USING OXFORD NANOPORE SEQUENCING
Free University (FU) Berlin - 10 – 14 February 2020
This course will... -
Trimming stringency w/ excessive data
I'm in the process of assembling a 500Mb animal genome and have both Illumina and PacBio data to work with using a hybrid assembly approach. Generally...Last edited by adamrork; 12-12-2019, 08:49 PM. -
Finding a genome assembly in BioProject
Hey all, fresh MSc. student and user here.
I'm looking for the genome assembly of Chaenocephalus aceratus (Antarctic blackfin icefish)... -
Genome assembly using oxford nanopore sequencing
Course: GENOME ASSEMBLY USING OXFORD NANOPORE SEQUENCING
Course website: https://www.physalia-course... -
Genome Assembly vs Reference Genome for slicing around mutation location
Hello friends,
I have a bam file and corresponding vcf file from some source. I am trying to slice the DNA across its mutation... -
Genome Assembly and Annotation Workshop in Berlin.LastCall
Dear all,
we would like to inform you that we have the last 4 places left for our course: "Assembly and Annotation of genomes",... -
Hi-C based genome scaffolding, phasing, and metagenomic devoncolution
Phase Genomics has pioneered the use of Hi-C for the assembly of genomes and metagenomes. We originally published our first assemblie...
