Hello,
I've been trying to install Maq onto a 64bit linux system. I've looked at the other threads that have had problems with Maq but nothing...
62 results in 0.0048 seconds.
-
Maq Installation Fail
-
Missing Software Sources (BATMAN & MAQ)
Hello All
I am trying to find these two software's
--------------------------------------------------------------------------------------------------... -
read length a problem when mapping with MAQ
Hi,
I have a file containing 36.8 million reads, as suggested in the MAQ manual I divided the file so that i had files containing 2 million... -
Maq error after using cutadapt
I have some small RNA data, generated with a GAIIx, and I need to trim the adapter sequence off the 3' end. I used cutadapt, which seemed easy enough,... -
How to find out if mapping is correct/not
Hi all.
I'm really new to sequencing.
I'm trying to map single end RNA-seq reads (short) to reference genome using (any) short read aligner.... -
Reverse engineering BAM files: BAM -> FASTQ
How can I possibly extract the reads from a BAM file and put them into a FASTQ file for simulation (maq simutrain, then maq simulate)?
... -
problem with running MAQ
I downloaded the MAQ and installed it as instructed in the manual. I moved the binary files to /home/user/bin directory and then I could run the maq commands...Last edited by seq_lover; 10-30-2011, 09:41 PM. -
Using MAQ to simulate illumina pair-end reads
Hello there, I was trying to simulate illumina pair-end reads by using MAQ for my project but ran into a couple of questions>>
1)... -
[BMC] Single-nucleotide resolution analysis of the transcriptome structure of Clos.
http://www.biomedcentral.com/1471-2164/12/479
Single-nucleotide resolution analysis of the transcriptome structure of Clostridium beijerinckii... -
Choosing an Assembler(s)
Hey all,
I am trying to choose the best assembler(s) for a project I am working on. I was looking through the wiki page, and there are... -
Maq Segmentation fault
I'm trying to use Maq software but i've face with some problems.
1. Conversion of *qseq.txt files (obtained after demultiplexing) to fastq... -
MAQ .map files to .bed/.sam for MACS
Hello,
I would like to use the output .map of a MAQ alignment of unpaired reads as input for the MACS peak caller, and so I want to convert... -
Geneious Pro 5.3 Beta available now!
Geneious Pro™ continues to improve, with the beta of version 5.3 available now. Download Geneious Pro 5.3 Beta to get a sneak peak at the latest features... -
MAQ simulated read header names
Hi,
I'm using MAQ to simulate reads and I was hoping someone could shed some light on how the read names are generated. It looks as though... -
Geneious Server now available!
First Customers Announced
Two leading US government agencies are the first customers to purchase Biomatters’ new software package, Geneious Server™...
