I downloaded the MAQ and installed it as instructed in the manual. I moved the binary files to /home/user/bin directory and then I could run the maq commands from anywhere. i already converted reference fasta to bfa and fastq to bfq. When I am trying to run the following command i get an error. ANy help is appreciated.
error:
Code:
/home/user/bin/maq map -n 2 -e 70 -u [email protected] [email protected] ref.bfa [email protected] 2> [email protected]
Code:
maq: match.cc:557: int ma_match(int, char**): Assertion `fp_bfa' failed. Aborted
