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Mate-pair sequence structural variants
I was given a mate-pair whole genome dataset that was sequenced on a SOLID 5500xl. I was interested in knowing if anyone has had any experience in doing... -
Sophie's choice: Random mate-pairs or gel selection in Illumina?
Hi guys!
I'm sequencing and assembling a de novo invertebrate genome of about 0,8Gb. I want to make a lane run of Illumina nextera mate-pairs,...Last edited by Marcela Uliano; 01-08-2015, 07:35 AM. -
Mate-pair information damaged on file merge
Hi all,
I'm trying to merge WGS data for one sample that's been run across 6 lanes.
Now the six individual files all validate (with... -
MG-RAST - remove or retain non-overlapping paired-end reads
Removing non-overlapping paired-end reads is the default option in MG-RAST. I was just wondering, did anyone compare the results when (1) removing and... -
Mate-Pair Illumina library problems
Hi, I am about to start a resequencing project on the HiSeq 1000 searching for rearrangements in a bacterial genome.
This is the 1st time I am...
