I'm going to jump right into the problem and put details below for clarification:
What are the possible causes of mapping high quality...
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Metatranscriptome read mapping yielding a highly left skewed ORF TPM distribution
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Question: Metatranscriptome binning
Hi Everyone!
We work with a lignocellulose-degrading microbial consortia. Within a time-series experiment of an enriched culture, we perform...
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correlate taxa with the gene function
Hi,
I am doing a project on metatranscriptomics. I followed the Trinity tutorial for doing differential gene expression and annotations....
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Novice at meta-transcriptomics
Dear all,
I am a research fellow at Birmingham UK, looking to study meta-transcriptomics from colon biopsies in patients with colitis. I am very...
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metatranscriptomics protocol
Hi all,
we're planning to do some metagenomics and metatranscriptomics runs of 5 sediment samples along a depth gradient in a lake,...Last edited by furor; 03-21-2015, 09:29 AM.
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Resequencing the same Illumina library several times
Hi,
I hope I am in the right forum. I have a Illumina library made of total RNA for a metatranscriptomics study.
If I sequence the...
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Hello, everybody!
I am a new comer and also a new researcher on metagenomics and metatranscriptomics, So there may be many needs for help from you in future!!!
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Group Head Reads Threads
Hi all
Here to see what everyone is reading as source of their arguments for buying/using different sequencers. We do both genomics and...
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Oceanographer, microbial ecologist
I'm a postdoc in Marine Science at the University of Georgia. I'm working on metatranscriptomics from marine microbial communities and the identification...
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Aligning against two yeast genomes?
Dear all
I am making a research proposal, and looking into RNA-Seq for metatranscriptomics of 2 different yeasts in the same sample (S....