Hello all,
I am a newbie at bioinformatics and am trying to analyse some miRNA data from the SOLiD sequencer I.e. color space csfasta format....
7 results in 0.0021 seconds.
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miRNA analysis
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Finding putative targets for novel miRNAs produced from miRNA-seq analysis
Hello,
I recently used mirAnalyzer to predict novel miRNA's from Illumina sequencing. I was wondering if anyone had suggestions on how... -
miRDeep-p "problem in read format"
Hi!!
I am using miRDeep-p since 1 week and everything was OK until I execute the last script. In the manual this script is named miRDeep.pl,... -
mirDeep-2 novel miRNA identification
Dear all
I would like to use mirDeep_2 for to identify novel miRNAs but I'm not sure which tool should I use, could you please let me know... -
DE analysis using mature miRNAs with different precursor sequences
Hi,
I have an interesting situation. I am trying to perform a DE analysis on miRNAseq data using mirDeep2 from the miRNAs_expressed_all_samples_now.csv... -
How to use DESeq with non Integer values from mirdeep2
Hi,
I've recently started using mirdeep2 for miRNAseq data and would like to do a DE analysis between two conditions.
The... -
miRNA seq analysis - large numbers of non-aligning reads
Hello,
as part of my work I have been given the task of analyzing data from miRNA-seq. Such data was already preprocessed by a facility...
