I cannot clearly understand why there are multireads in chip-seq data? What they mean?
If protein bind to specific sequence after experiment...
6 results in 0.0029 seconds.
-
Multi-reads of ChIP-Seq data
-
Multireads reported as unique by Tophat
Hello,
I am working with RNAseq data, produced on the Illumina Hiseq platform. My reads are paired-end and 76bp long. I map them against... -
BWA unique mapping, mutireads
Hi,
Question: What is the best way to remove reads that map to multiple locations?
What I have done so far:
I have a 76x2... -
TopHat multireads?
Hi,
I am playing with some RNA-seq data and am trying to understand how TopHat is reporting its multireads. Can anybody explain how the... -
TopHat SAM - Expressing Paired End Multi-reads
Hi,
I've been struggling to understand exactly how TopHat represents multi-reads in its output SAM file, especially in the context of paired... -
RPKM and multiple reads, tophat and cufflinks
My understanding of the RPKM calculation in Tophat is that it includes multi-reads that match < 40 times in the genome (by default).
...
