Are there any tools or R packages for calculating the new amino acid chain, given an indel?
I've been asked to provide a set of putative...
21 results in 0.0031 seconds.
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Tool or package to convert new peptide sequence from frameshift variant?
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Research scientist in bioinformatics in Sweden
Protein Structure and Bioinformatics Group (http://structure.bmc.lu.se/) at Lund University, Sweden is looking for a research scientist/postdoctoral fellow... -
Merging CNV data with Mutation data and running on MutSigCV
I am trying to find the most significant altered genes and I was thinking of using only 1 tool for significance test which is MutSigCV instead of MutSigCV... -
Pan-Cancer Patterns of RNA-Binding Proteins in ~7000 tumor RNA-seq samples
RNA-binding proteins (RBPs) regulate the expression of thousands of transcripts, and some are reported to be involved in human tumorigenesis.
...Last edited by yjhua2110; 02-02-2018, 03:10 AM. -
Distinguish sequencing errors and real mutations in mitochondria data
Hi，all
We are searching a silico method to distinguish sequencing errors and real mutations from mitochondria sequencing data. Please... -
Postdoctoral Fellow (Cancer Genomics/Bioinformatics) - UNSW, Sydney, Australia
About the role
- Based at University of New South Wales, Sydney, Australia
- $70,381-$93,840 plus (9.5% Superannuation and annual leave loading)
- Fixed
Last edited by jasewong; 11-28-2016, 05:29 AM. -
Mutation/variant calling with cell-line sequencing data
I plan to use whole exome sequencing data to identify mutation events induced in a human cell-line following treatment with various reagents.
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Counting the total number of SNPs in a transcript
Hi,
I have RNAseq data that has been aligned to reference transcriptome and the aligned bam file is sorted and indexed.
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Detecting mutations from RNAseq data
HI,
I have RNAseq data from samples which has to be aligned to reference Transcriptome. Later I would like to compute number of times a... -
Low Frequency Mutation Detection by NGS
See new technology for gene variation enrichment using PCR prior to NGS:
http://bioaccent.org/cancer-sciences...e-in-press.php
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need help to download SPLINTER mutation caller
I am interested to try SPLINTER to detect the mutation with pooled sequencing data. I've already registered on ibridge and ordered the licence with my... -
How to search for a known mutation in WGS of disease?
I am working with researchers who have identified a gene mutation which significantly affects protein function.
They want to search all existing... -
get sequence context from a reference genome
hi, everyone.
If I have a tsv file of somatic mutation profile that contains information of:
1. mutation information (for example, a mutation... -
Cancer cell line whole-genome or exome data
Hi everybody!
I am beginner with NGS, and I am focusing on cancer cell lines research now. Just want to ask:
Is there any resource... -
mutation detection but has to exclude known polymorphism?
Recently got a project on human data. It is easy to find out all the mutations. But how do I exclude all the know Polymorphisms, any approach? Thanks...
