Hello,
I am doing exome sequencing of non-malignant tumors on Ion Proton PI chip.
Sequencing works fine, but when
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11 results in 0.0029 seconds.
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library dilution
Hi everybody. I am trying to prepare GBS library. My DNA fraqment lenght is 200 bp. I have concentration of library as nanogram/microliter (for example,1.2... -
Hello!! I'm NEW :-)
Hello all,
I am new to this site. I am based at Cardiff University and use the Ion torrent platforms to analyse the genetics of Mental Health.... -
tmap - set up read length to map?
Hello All,
I would really appreciate if somebody could help me. I use this command to run tmap on the Ion Torrent server:
...Last edited by kadri; 11-12-2013, 02:48 AM. -
Look for somatic mutation from Ion Proton Exome Sequencing
I've used Strelka and MuTect to find somatic mutations in SOLiD and Illumina data. They worked pretty well, but not so well for Ion Proton Exome (yes,... -
Ion Proton Q20
Hello All, we've only just done our first Proton run and the per base quality of the FastQC has ~90% of our data in the Q20 to Q28 range, should I be... -
Bacterial RNA sequencing workflow for the PGM
Attached is a workflow describing how we isolated, ribo-depleted, and sequenced RNA from [I]E. coli[I] on the Ion Torrent PGM.... -
Problem with Combine Alignments
Hi
We're using Ion Proton with the latest Torrent Suite (3.4.1).
When we would like to merge data from different runs belonging... -
Proton Data
Hello, does anyone know where I might get my hands on an exome dataset from the Proton? -
Ion Torrent libraries on proton?
Hello SEQanswers users
Does anyone have the adaptor sequences for the Proton?
I am hoping at one point to run an Ion Torrent... -
Desktop PC specs, and Server specs for MiSeq, PGM, and Proton
Hi!
We're starting up a sequencing lab with MiSeq, PGM, and Proton on it. I'm really new here, so I need help regarding this matter.
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