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New Genomic Method Uncovers Ancient Hominin DNA
UC Berkeley researchers have developed a new computational technique that identifies regions of the human genome inherited from previously unknown archaic... -
Fusion primers
Hello,
has anyone used or knows how can I get adapter sequences and MID (multiplex identifier) tags, can I buy it or a I need to design... -
condetri illumina sequences trimming
Hello!
I'm new in bioinformatics and I'm trying to launch the program condetri for the quality trimming of my paired end illumuna sequences. in... -
Fastest way to add Ns to variable length sequences to get uniform length
I have a fasta file with a thousand sequences with a distribution of lengths between 100 and 150bp. I would like to add Ns to all sequences whose length... -
fasta files from NCBI
Dear all, In creating a local blast database, I downloaded fasta files from ftp://ftp.ncbi.nlm.nih.gov/refseq/release/viral/ and http://www.ncbi.nlm....Last edited by kaps; 02-02-2015, 04:46 AM. -
Pipeline for obtaining phased haplotype sequences w/out references
Hello,
I'm working on a pipeline for obtaining phased haplotype sequences from diploid organisms. The input data are Illumina reads from... -
Cufflinks to find introns, sequences look wrong?
Hello,
I'm using a TopHat, Cufflinks pipeline to find intronic sequences for a species I am interested in. I run TopHat, then run Cufflinks with... -
bwa sampe error ... bad database format?
Hi,
I am running bwa 0.5.9 on a custom, indexed, sequence database comprised of various genbank sequences.
When I run:
... -
Looking to find number overlapping sequences between fastq files
Hi all, just starting to analyse NGS data, beginning to realise I should have been here asking for help from the beginning!
I have a number... -
TruSeq Sample Prep, Enrichment PCR primer sequences
Has anybody made enrichment PCR primers for Illumina's new TruSeq DNA Sample Prep kit that work? If so, would you share the primer sequences with me?...
