Gday all,
I am attempting to use SOAPsnpZ to call SNPs from SOLiD data that I aligned using SOAP2. After conducting the alignment I 'sorted'...
6 results in 0.0029 seconds.
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SOAPsnpZ error : 'std::out_of_range'
Last edited by ashNZ; 10-09-2013, 06:21 AM. -
SoapSNP errors
Hello, I am getting these errors when running soapsnp (infact I am running crossbow and it is in turn running soapsnp) . Any help would be appreciated.... -
Crossbow alignment format
I am using crossbow v1.1.1 on a local computer cluster to map a set of human SOLiD reads and call the variants. Crossbow glues together the bowtie aligner... -
Questions about soapaligner and soapsnp
I am using soapaligner+soapsnp to find SNVs in our pair-end DNA data. I read the online manual, and the tools have been running smoothly.
...Last edited by superligang; 01-07-2011, 11:56 AM. -
SOAP:segmentation fault
Hi All,
I am trying to map solexa PE reads (fastq) from different strains onto reference scaffolds file (fasta) using soap2. The questions I have... -
help, the SOAPsnp input files format
Hi all,
Is anyone familiarity with SOAPsnp input files?
My alignment file is sam file. I want to use SOAPsnp call SNP.
Is...
