I'm using Galaxy to analyze RNAseq results for differential gene expression in Drosophila mel.
In tophat2, it says that I can supply...
7 results in 0.0028 seconds.
-
How to use Gene Annotation Model in Tophat2
-
Tophat/GSNAP: proper-paired reads
Hi Everyone,
I tried Tophat v 2.0.6 and GSNAP v 2013-02-05 to align Illumina paired-end reads. However, the numbers of proper-paired reads...Last edited by riziai; 04-26-2013, 12:40 PM. -
TopHat failed in tophat_reports with incompelete accepted_hits*.bam
when I run TopHat 2.0.6 to align my RNA-Seq to dm3, it failed when reached the tophat_reports section, the running log is:
[2013-03-23 05:29:05]... -
New tophat error? `GLIBCXX_3.4.15' not found during segment-based junction search
So far as this error goes I have not been able to find anyone else complaining about it on the interwebs. What is worse: I just did a whole bunch of... -
Cufflinks 2.0.2 segmentation fault
I am using 100 bp paired end Illumina Hi-seq data with about 50M reads and trying to use tophat / cufflinks for RNA-seq analysis for human data, using... -
Tophat 2.0.6, empty insertions and deletion bed files
I've been using Tophat version 2.0.6 for a while and it seemed to work fine. However, today I wanted to use the insertions.bed and deletions.bed files... -
tophat installation error
Hi All,
I've been having some trouble installing tophat and I was hoping you could help, from everything is fine up until I run make, then...
