Dear all
I am new to dindel and I tried to call indels from a pool of bam files. I followed their manual, which ran smoothly until step 3 when I used the --bamFiles option to analyze all bamfiles together.
Then I don't know which library file should I feed in (in first step, it produces a library file for each bam file). Then I merged the library lifes by row and fed into step 3, only to see errors:
can any one tell me how to produce merged library files for multiple bam files?
Thanks a lot
I am new to dindel and I tried to call indels from a pool of bam files. I followed their manual, which ran smoothly until step 3 when I used the --bamFiles option to analyze all bamfiles together.
Then I don't know which library file should I feed in (in first step, it produces a library file for each bam file). Then I merged the library lifes by row and fed into step 3, only to see errors:
Storing library: unknown
Error: libName: unknown
Duplicate library IDs.
Exception: Library error
Error: libName: unknown
Duplicate library IDs.
Exception: Library error
Thanks a lot
Comment