Hi to all,
this is my first post here. I'm a computer scientist (with few background in molecular biology...) and started to work on a program based on genome signatures...
Are there tools to find prokaryotic ribomsomes automatically (RNA 70S built from 23S, 5S, 30S) for unknown sequences?
The tool should take any complete prokaryote genome sequence as input and output some file with start and stop coordinates - it needs to work without annotation, i.e. should do some sequence tests...
Ideally I want to call the tool in an automated process chain, but some manual steps would be acceptable.
Best regards
Martin
this is my first post here. I'm a computer scientist (with few background in molecular biology...) and started to work on a program based on genome signatures...
Are there tools to find prokaryotic ribomsomes automatically (RNA 70S built from 23S, 5S, 30S) for unknown sequences?
The tool should take any complete prokaryote genome sequence as input and output some file with start and stop coordinates - it needs to work without annotation, i.e. should do some sequence tests...
Ideally I want to call the tool in an automated process chain, but some manual steps would be acceptable.
Best regards
Martin