I am considering using Rnnotator as a pre-processor, primarily to cut down on the enormous memory requirements of the Velvet/Oasis assemblers. However, I can find no information about how much memory the Rnnotator pipeline itself requires. Is this a program that can be run on a standard desktop computer (i.e., 4-8 GB RAM), or are more memory intensive computers still required?
I have searched the literature, the forums, and the manual, but have found no answers.
Though I don't have my data yet, I am anticipating ~200-400 million 100 bp paired-end reads.
Does anyone have experience with this software?
I have searched the literature, the forums, and the manual, but have found no answers.
Though I don't have my data yet, I am anticipating ~200-400 million 100 bp paired-end reads.
Does anyone have experience with this software?
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