RNA-seq data

[Torst]

Thanks Richard! I was a bit out of my microbial area of expertise with this question.

[Richard Finney]

There is one donor ...

Searching for "hapmap "Homo sapiens"[porgn:__txid9606] and rna-seq" in GEO
Then search for "hapmap".
This record: http://www.ncbi.nlm.nih.gov/geo/quer...i?acc=GSE19481
Check links to commerical provider (Coriell) .. it contains one CHB B-cell(?) rna-seq ...

http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM18526

This query "hapmap and asian and "Homo sapiens"[porgn] and rna-seq" turn up another record.

[lre1234]

there's also some RNA-seq from the YRI population: http://www.ncbi.nlm.nih.gov/geo/quer...?acc=GSM453869

I was also looking for some of the Chinese populations.

[fubar]

Didn't they only sequence genomic DNA? ie. there is no RNA-Seq?

It's hard to figure out where things are, but there is at least some hapmap CEU sample RNAseq (eg) http://www.ncbi.nlm.nih.gov/geo/quer...i?acc=GSE25030 in GEO?

[Torst]

Didn't they only sequence genomic DNA? ie. there is no RNA-Seq?

[lre1234]

Hi,
Does anybody know where I could get RNA-seq data from the HAN Chinese hapmap/1k genomes population. RNA-seq derived from the cell lines from these individuals. I can't find any of this on the GEO or SRA, but can find other populations.
thanks