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I wanna compare the transcriptome data of 2 species gained by rna-seq.
blastx is better or try to get protein from transcripts and then use blastp is better?
My concern is the protein sequences are predicted from transcripts.
And what is the best way to predict/get protein sequences from transcripts?
blastx is better or try to get protein from transcripts and then use blastp is better?
My concern is the protein sequences are predicted from transcripts.
And what is the best way to predict/get protein sequences from transcripts?