I'm wondering if anyone has a certain control DNA they like to use to control batch quality when doing Illumina ChIP-Seq library preps? I don't want a spike-in, just some processed, clean DNA that can be prepped in every batch of preps as a standalone sample. I'm considering using the ERP control as a standalone input since it's provided anyway and I'm not using it as a spike-in. I'm assuming it's just double stranded DNA that hasn't been end repaired yet? Please let me know if I'm wrong.
Thanks in advance!
Jen
Thanks in advance!
Jen