Hello,
I am using Windows 7 and R 2.12.2
When I try to run these two lines I get the following error from getGEO
library(GEOquery)
GSE7562 <- getGEO("GSE7562")
Found 1 file(s) GSE7562_series_matrix.txt.gz Error in file(con, "r") : cannot open the connection In addition: Warning messages: 1: In download.file(sprintf("ftp://ftp.ncbi.nih.gov/pub/geo/DATA/SeriesMatrix/%s/%s", : download had nonzero exit status 2: In file(con, "r") : cannot open file 'C:\Users\APD\AppData\Local\Temp\RtmptmeDAb/GSE7562_series_matrix.txt.gz': No such file or directory
Am I missing something to get GEOquery working?
Thanks in advance,
I am using Windows 7 and R 2.12.2
When I try to run these two lines I get the following error from getGEO
library(GEOquery)
GSE7562 <- getGEO("GSE7562")
Found 1 file(s) GSE7562_series_matrix.txt.gz Error in file(con, "r") : cannot open the connection In addition: Warning messages: 1: In download.file(sprintf("ftp://ftp.ncbi.nih.gov/pub/geo/DATA/SeriesMatrix/%s/%s", : download had nonzero exit status 2: In file(con, "r") : cannot open file 'C:\Users\APD\AppData\Local\Temp\RtmptmeDAb/GSE7562_series_matrix.txt.gz': No such file or directory
Am I missing something to get GEOquery working?
Thanks in advance,
Comment