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  • salmonella
    Junior Member
    • Feb 2011
    • 5

    #1

    Problem doing string search in Tablet

    HI
    I have a rather strange problem with Tablet (I am using Tablet version 1.11.05.03 and I have loaded in Tablet a .afg output file from VelvetG). When I search in Tablet for a sequence string (e.g. AATGCTTA) in the consensus sequence, Tablet will only search the active contig and ignore all the other contigs. I have deselected the ‘search in current contig only’ box and have selected the ‘search in consensus/reference’ option. Curiously, if I select the ‘search in current contig only’ box, it will search the current contig just fine. Does anyone know what I need to do so that Tablet will search all the contigs and not just the one that is currently selected?

    Thanks
  • maubp
    Peter (Biopython etc)
    • Jul 2009
    • 1544

    #2
    That sounds like a bug, email them in case they don't see this thread.

    Comment

    • imilne
      Member
      • Jan 2010
      • 68

      #3
      Thread (and email) seen.

      It seems to be a bug; I'll know for sure once back at work on Monday.
      Our software: Tablet | Flapjack | Strudel | CurlyWhirly | TOPALi

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