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  • stoker
    Member
    • Oct 2010
    • 17

    Fastq sorting and common part?

    Dear community,
    I have 3 huge fastq files for paired end multiplexed read:
    I would like to extract from them the common part, so clusters for which I have both reads and multiplexing index. I would like also to have the reads sorted in the same order in all the files.
    Do you suggest any software that could help me with it?
    Tomasz Stokowy
    www.sequencing.io.gliwice.pl

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