I have download the source code of the ALLPATHS from the MIT. But I can not find any information about how to compile or install. Where can I get the information about how to install and use?
-
-
The manual seems to be a separate download to the .tgz package:
ftp://ftp.broad.mit.edu/pub/crd/ALLP....0.manual.docx -
/usr/lib/gcc/x86_64-redhat-linux/4.3.2/../../../../include/c++/4.3.2/backward/auto_ptr.h:196
./kmer_freq/EvaluateStrongKmers.cc:302:
when I compile the software, it report a bug. The above files seem to be something wrong.Comment
-
I think I solve the problem after I change the system language from Chinese to English.Comment
-
Hi anyone1985Originally posted by anyone1985 View Post
Are you running AllPaths? Does it work? What version are you using? I tried with version 3.3.2 and i always get error that says -
Looks like the command PrepareAllPathsInput did not complete
Did you get this error?
What command do you give for TARGET=import and TARGET=Standard
thanks in advance
himalayaComment
-
Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?
Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating...Yesterday, 09:55 AM -
Researchers using sequencing and genomics tools often have to make trade-offs. They can choose between speed or scale, short reads or long-range information, or targeted panels or a view of the whole transcriptome. New technologies that have been released this year are built to address those tough choices.
We asked six companies the same four questions to learn about their latest products. The new technologies bring a lot to the table, including rethinking sequencing...
Comment