Does anyone has experience to run soapfusion,
After alignment,soapfusion will output result.out and result.2Seqs.
and use soapfusion.pl to discovery fusion gene.
When I use soapfusion.pl,it said -psl <ref_Gene.psl> include package in hg18,but I can't find this file.
Also,I don't know where is -region <ref_Gene_exon_region.psl> file is?
If someone know where the file is,or this annotation file can create by myself.
Please tell me
Thanks
Best regard!
After alignment,soapfusion will output result.out and result.2Seqs.
and use soapfusion.pl to discovery fusion gene.
When I use soapfusion.pl,it said -psl <ref_Gene.psl> include package in hg18,but I can't find this file.
Also,I don't know where is -region <ref_Gene_exon_region.psl> file is?
If someone know where the file is,or this annotation file can create by myself.
Please tell me
Thanks
Best regard!
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