Hi all,
I'm new at using ABySS and when I ran the following command on ABySS v 1.2.7:
abyss-pe k=25 n=10 in=' /path/to/reads/file/1 /path/to/read/files/2' name=LIB
the following files got created in the output directory:
coverage.hist LIB-1.adj LIB-1.fa LIB-1.path LIB-3.adj LIB-3.fa LIB-3.sam.gz LIB-bubbles.fa LIB-indel.fa
Now, obviously I'm missing something because the main assembly file, LIB-contigs.fa is missing! Any ideas what I'm doing wrong?
Any help much appreciated! Thanks in advance!
I'm new at using ABySS and when I ran the following command on ABySS v 1.2.7:
abyss-pe k=25 n=10 in=' /path/to/reads/file/1 /path/to/read/files/2' name=LIB
the following files got created in the output directory:
coverage.hist LIB-1.adj LIB-1.fa LIB-1.path LIB-3.adj LIB-3.fa LIB-3.sam.gz LIB-bubbles.fa LIB-indel.fa
Now, obviously I'm missing something because the main assembly file, LIB-contigs.fa is missing! Any ideas what I'm doing wrong?
Any help much appreciated! Thanks in advance!
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