Please could anyone direct me to sources (ftp or otherwise) where I could find a number of FASTQ files pertaining to various organisms along with the links for the corresponding reference genome sequences?
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You can obtain sequences in fastq format from short sequence read archive at NCBI (http://www.ncbi.nlm.nih.gov/sra), GEO http://www.ncbi.nlm.nih.gov/geo/ (search for "high throughput sequencing"[Platform Technology Type]) or European nucleotide archive (http://www.ebi.ac.uk/ena/home). You can find the reference genomes at NCBI.Last edited by GenoMax; 09-09-2011, 03:34 AM.
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