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  • fancy
    Junior Member
    • Sep 2011
    • 2

    #1

    bowtie output

    Hi!
    I see bowtie can easily export the aligned reads into a file. But I wonder if it can also export the reference sequences that are algined by the input sequences into a file. I'll appreciate your help.

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    16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
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