DEXSeq and Biobase

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MerFer

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Join Date: Sep 2009

Posts: 21
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#1

DEXSeq and Biobase

10-14-2011, 03:42 AM

Hi,

I'm trying to instal DEXSeq for differential exon usage. I always get the error

Error : package 'Biobase' 2.10.0 was found, but >= 2.13.5 is required by 'DEXSeq'

The problem is that the latest version of the Biobase in Bioconductor.org is 2.12.2. Do you know if there are higher Biobase versions?

Thank in advance
Tags: biobase, dexseq, differential exon usage
Thomas Doktor

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Join Date: Apr 2009

Posts: 105
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#2

10-14-2011, 03:50 AM

You have to install R2.14 in order to install Bioconductor 2.9 which contains Biobase 2.13.10. Note that R2.14 is alpha and Bioconductor 2.9 is in development.
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