I would like to use SNAP(http://www.biomedcentral.com/1471-2105/5/59) to annotate genes of one of our genomes. In order to do so I am planning to generate training dataset using another genomes for which we have annotated genes and eventually build HMM file of this genome. Has any one used SNAP before for similar purpose? If yes would you please let me know the steps?
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Researchers using sequencing and genomics tools often have to make trade-offs. They can choose between speed or scale, short reads or long-range information, or targeted panels or a view of the whole transcriptome. New technologies that have been released this year are built to address those tough choices.
We asked six companies the same four questions to learn about their latest products. The new technologies bring a lot to the table, including rethinking sequencing...
