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  • ferrmi
    Junior Member
    • Nov 2011
    • 1

    #1

    Bioscope pairing problem

    Hi

    I'm newbie with bioscope software, and when i run the pairing, it's failing show this error:

    java.lang.IllegalStateException: Input files /ngs/results/solid/prueba_tepehuanos_1_2/temp.04/pairing.dat.tmp.markdupl and /ngs/results/solid/prueba_tepehuanos_1_2/temp.04/pairing.qual.tmp files are out of registration at reads 1769_37_1536 and 1769_37_1544.
    Every bead in the quality files must appear in at least one of the mapping files.

    Someone know how to do in this cases?

    Thanks for you help

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