Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
Collapse
 
  • Page of 1
  • Filter
  • Time
  • Show
Clear All
new posts
Previous template Next
  • #1

    GATK snp calling

    The number of LowQual using ApplyRecalibration as the same as the LowQual in raw.vcf.
    LowQual number does not change!!! and a little PASS change to TruthSensitivityTranche99.00to99.90.
    should I filtering itself based on the VQSLOD values? I followed the pipeline:
    Page not found
    http://www.broadinstitute.org/gsa/wi...th_the_GATK_v3
    If you are unable to find something or have a question about our new website, please email [email protected]. For other inquiries related to the Broad Institute, the necessary contact information can be found here.
    Tags: None
Previous template Next

Latest Articles

Collapse
  • seqadmin
    Recent Advances in Sequencing Analysis Tools
    by seqadmin


    The sequencing world is rapidly changing due to declining costs, enhanced accuracies, and the advent of newer, cutting-edge instruments. Equally important to these developments are improvements in sequencing analysis, a process that converts vast amounts of raw data into a comprehensible and meaningful form. This complex task requires expertise and the right analysis tools. In this article, we highlight the progress and innovation in sequencing analysis by reviewing several of the...
    05-06-2024, 07:48 AM
  • seqadmin
    Essential Discoveries and Tools in Epitranscriptomics
    by seqadmin




    The field of epigenetics has traditionally concentrated more on DNA and how changes like methylation and phosphorylation of histones impact gene expression and regulation. However, our increased understanding of RNA modifications and their importance in cellular processes has led to a rise in epitranscriptomics research. “Epitranscriptomics brings together the concepts of epigenetics and gene expression,” explained Adrien Leger, PhD, Principal Research Scientist...
    04-22-2024, 07:01 AM
View All

ad_right_rmr

Collapse

News

Collapse
Topics Statistics Last Post
A Closer Look at the Enigmatic Genomes of Oikopleura dioica by seqadmin
Started by seqadmin, 05-10-2024, 06:35 AM
0 responses
15 views
0 likes
 Last Post seqadmin
by seqadmin
05-10-2024, 06:35 AM  
Advanced Epigenome Editing Platform Explores Gene Regulation Mechanisms by seqadmin
Started by seqadmin, 05-09-2024, 02:46 PM
0 responses
21 views
0 likes
 Last Post seqadmin
by seqadmin
05-09-2024, 02:46 PM  
Telomere Maintenance by PARP1: A New Perspective in Cancer Research by seqadmin
Started by seqadmin, 05-07-2024, 06:57 AM
0 responses
18 views
0 likes
 Last Post seqadmin
by seqadmin
05-07-2024, 06:57 AM  
Enhanced Neoantigen Detection: Introducing NeoHunter by seqadmin
Started by seqadmin, 05-06-2024, 07:17 AM
0 responses
19 views
0 likes
 Last Post seqadmin
by seqadmin
05-06-2024, 07:17 AM  
View All
Working...
X