Unconfigured Ad

Collapse
X
Collapse
 
  • Page of 1
  • Filter
  • Time
  • Show
Clear All
new posts
Previous template Next
  • AAWT
    Junior Member
    • Jun 2011
    • 6
    #1

    GFF Annotation file

    Dear all,

    I am working with Blast2GO and exported annotation as GAF file and for further analysis I need to use CLC genomics workbench which is only accepting GFF/GTF or GVF files.
    Can you help me for file format conversion

    Thanks

    AAWT
    Tags: None
  • Jmcbulls
    Junior Member
    • Mar 2012
    • 1
    #2
    I have the same question, from Blast2GO I can export it as a GAF (Gene Annotation File Format 2.0), .annot, GOStat, or GeneSpring Format. Is there a way to merge this data with my .GTF file in order to combine location information with my new Blast/GO data?

    Thanks,
    Jack

    Comment

    • mm.perrineau
      Member
      • Sep 2012
      • 12
      #3
      Helllllppppp PLEASE

      I have exactly the same question !!!!!
      Somebody have the answer ???

      Comment

      • AAWT
        Junior Member
        • Jun 2011
        • 6
        #4
        Yes, if you exported GFF file from Blast2GO, you can force import this file in CLC in gene-ontology GFF file format and GFF is required format for CLC.
        Regards

        AAWT

        Comment

        Previous template Next

        Latest Articles

        Collapse
        • SEQadmin2
          Cancer Drug Resistance: The Lingering Barrier to Rising Survival
          by SEQadmin2



          Cancer survival rates have significantly increased in the last few decades in the United States, reaching a combined 70% 5-year survival rate by 2021. Behind this number, there are years of research to find new therapies, drug targets, and early detection methods. But there is one core challenge that keeps slowing down these advances, and it’s about drug resistance.

          There is no single reason why many patients don’t respond to treatment as expected. Cancer is...
          Today, 05:17 AM
        • GATTACAT
          Reply to Nine Things a Sample Prep Scientist Thinks About Before Sequencing
          by GATTACAT
          Love this - good data definitely starts from good input, and poor input can only give relatively poor data. I particularly like the mention of Nanodrop/absorbance based methods for quantification. It's such a toss up if you'll get an accurate reading or what amounts to a randomly generated number, and a lot of library/sequencing related issues can be traced back to poor quant.
          07-01-2026, 11:43 AM
        • SEQadmin2
          Nine Things a Sample Prep Scientist Thinks About Before Sequencing
          by SEQadmin2


          I’m not a sequencing expert. I’m a purification scientist who uses NGS to evaluate workflows my group develops. With this perspective, we think about the sample first and the NGS workflow second. The sequencer is an exceptionally honest reporter, but it can only report on what you give it, so whether you get clean, interpretable data from an NGS workflow is largely determined before you begin.

          Here are nine questions we think about, in roughly the order they matter, before...
          06-18-2026, 07:11 AM
        View All

        ad_right_rmr

        Collapse

        News

        Collapse
        Topics Statistics Last Post
        Genome-Wide CRISPR Screen Uncovers Unlikely Psoriasis Target by SEQadmin2
        Started by SEQadmin2, Today, 10:08 AM
        0 responses
        5 views
        0 reactions
        		 Last Post SEQadmin2
        by SEQadmin2
        Today, 10:08 AM  
        Engineered Protein Motor Takes Its First Steps Along DNA Track by SEQadmin2
        Started by SEQadmin2, Yesterday, 11:05 AM
        0 responses
        7 views
        0 reactions
        		 Last Post SEQadmin2
        by SEQadmin2
        Yesterday, 11:05 AM  
        High-Resolution Sequencing Exposes Hidden Toxoplasma Diversity by SEQadmin2
        Started by SEQadmin2, 07-02-2026, 11:08 AM
        0 responses
        30 views
        0 reactions
        		 Last Post SEQadmin2
        by SEQadmin2
        07-02-2026, 11:08 AM  
        New AI Model Captures Long-Range Genomic Signals to Improve RNA Splice Site Prediction by SEQadmin2
        Started by SEQadmin2, 06-30-2026, 05:37 AM
        0 responses
        28 views
        0 reactions
        		 Last Post SEQadmin2
        by SEQadmin2
        06-30-2026, 05:37 AM  
        View All
        Working...