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  • AAWT
    Junior Member
    • Jun 2011
    • 6

    #1

    GFF Annotation file

    Dear all,

    I am working with Blast2GO and exported annotation as GAF file and for further analysis I need to use CLC genomics workbench which is only accepting GFF/GTF or GVF files.
    Can you help me for file format conversion

    Thanks

    AAWT
  • Jmcbulls
    Junior Member
    • Mar 2012
    • 1

    #2
    I have the same question, from Blast2GO I can export it as a GAF (Gene Annotation File Format 2.0), .annot, GOStat, or GeneSpring Format. Is there a way to merge this data with my .GTF file in order to combine location information with my new Blast/GO data?

    Thanks,
    Jack

    Comment

    • mm.perrineau
      Member
      • Sep 2012
      • 12

      #3
      Helllllppppp PLEASE

      I have exactly the same question !!!!!
      Somebody have the answer ???

      Comment

      • AAWT
        Junior Member
        • Jun 2011
        • 6

        #4
        Yes, if you exported GFF file from Blast2GO, you can force import this file in CLC in gene-ontology GFF file format and GFF is required format for CLC.
        Regards

        AAWT

        Comment

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