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  • bhargavpbk88
    Junior Member
    • Aug 2011
    • 3

    #1

    Finding Perfect matches and mismatches

    Hi can anyone say me how i can find perfect matches and mismatches present in a probe i mean i want to find probes having 1 mismatch, probes having 2 mismatches..............
  • maubp
    Peter (Biopython etc)
    • Jul 2009
    • 1544

    #2
    What kind of probe? Microarray?

    Comment

    • bhargavpbk88
      Junior Member
      • Aug 2011
      • 3

      #3
      i have probe information for hg18 genome i need to find pm and mm for them with mcf7 cancer cell line (for the reads mapped to the probes whether probe location is perfectly matched with them or how many mismatches are present for every probe)
      Last edited by bhargavpbk88; 01-19-2012, 09:32 AM.

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