Visualizing Mauve Alignments

[sphil]

Hey there,

i am searching for a genome brwoser which is capable of visualizing mauve (multi) genome alignments? Any hints?


Thanks in advance,

Phil

[maubp]

Do you mean other than Mauve itself?

[sphil]

Do you mean other than Mauve itself?

yep.... would be nice.

[tnabtaf]

Would GBrowse_syn (http://gmod.org/wiki/GBrowse_syn) work for you?

[sphil]

Perfect! Thanks so much. Almoast fullfilled my dreams in visualizing whole genome alignments!

[zzta]

Using GBrowse_syn to visualize mauve output

Sorry to revive this thread, but how did you accomplish the visualization with Gbrowse_syn? I'm a newbie here, so, thank you for your patience

I have installed GBrowse and updated it already, I am just not sure how it works.

[sphil]

wow, long time no see
Actually I can't remember but I guess i worked my way through their tutorial....