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hello everyone,
I have two illumna RNA-seq datasets of fastq gzip files which are corrupted and give following error "gzip: sample1.fastq.gz: unexpected end of file" when tried to extract. I tried using recovery program but i can't retrieve whole fastq file. I didnt have a backup too
But i have assembly done earlier on the same datasets i.e contigs and scaffolds. Main purpose is to do re-assembly with those raw reads. Can i retrieve raw reads from this assembly files? Any suggestions are welcome. Thank you and seqanswers is of great help all the time.
regards,
Ranga
I have two illumna RNA-seq datasets of fastq gzip files which are corrupted and give following error "gzip: sample1.fastq.gz: unexpected end of file" when tried to extract. I tried using recovery program but i can't retrieve whole fastq file. I didnt have a backup too
But i have assembly done earlier on the same datasets i.e contigs and scaffolds. Main purpose is to do re-assembly with those raw reads. Can i retrieve raw reads from this assembly files? Any suggestions are welcome. Thank you and seqanswers is of great help all the time.
regards,
Ranga