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  • detq182
    Member
    • Feb 2012
    • 20

    #1

    Custom local blast results

    how can i custom local blast results like the threshole of the E-value and make it lower.

    thank all.
  • SES
    Senior Member
    • Mar 2010
    • 275

    #2
    Originally posted by detq182 View Post
    how can i custom local blast results like the threshole of the E-value and make it lower.

    thank all.
    Read the manual. The option you want is "-e" if you are using legacy BLAST or "-evalue" if you are using BLAST+.

    Comment

    • poudap
      Junior Member
      • Oct 2014
      • 3

      #3
      how to set query coverage treshold and sequence identity

      As I run blast in results, those hit with even 1% coverage of query is included, how I can limit the results to at least 60% query coverage with percentage identity 80.

      Comment

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