I have been running genomeCoverageBed from my command line for months now. it works fine. I have about 17GB of available RAM and plenty of hard drive space. All of a sudden, it started to throw the std bad alloc error. Any ideas what that could be about?
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Try a memory check and file system check. These "all of a sudden" errors can point to file corruption issues.
Has the program (or compter system) been updated recently? -
Run "top" command at the same time in another window. If memory usage of running process approaches near 100%, that's your problem.Comment
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NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification,...10-30-2026, 06:46 AM
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