Has anyone used Bowtie software to do the analysis?
I have solexa data that I have aligned to one of the hu chromosomes. When I try to map using bowtie-maptool it gives me an error saying :
Could not find an id to map reference name "gi|12345678|ref|NT_12346727.12|" to.
Any clues why? Is there any other way of mapping this?
I have solexa data that I have aligned to one of the hu chromosomes. When I try to map using bowtie-maptool it gives me an error saying :
Could not find an id to map reference name "gi|12345678|ref|NT_12346727.12|" to.
Any clues why? Is there any other way of mapping this?
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