Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • About SOLiD's corona

    Hi,guys.
    I'm working with SOLiD sequence mapping recently.
    I used to use bowtie to do the mapping. But now I want to use corona.
    But it comes with so many problems when I carry out the installation on my pc:x86_64 GNU/Linux.
    Here is the information

    lane@lane-desktop[corona_Lite_4.2.2] make install PREFIX=/home/lane/app/test/
    make -C pairing install PREFIX=/home/lane/app/test/
    make[1]: Entering directory `/home/lane/app/corona_Lite_4.2.2/pairing'
    ************* Building perl...
    make -C perl
    make[2]: Entering directory `/home/lane/app/corona_Lite_4.2.2/pairing/perl'
    make[2]: *** No rule to make target `/usr/lib64/perl5/5.10.0/x86_64-linux-thread-multi/Config.pm', needed by `Makefile'. Stop.
    make[2]: Leaving directory `/home/lane/app/corona_Lite_4.2.2/pairing/perl'
    make[1]: *** [perl] Error 2
    make[1]: Leaving directory `/home/lane/app/corona_Lite_4.2.2/pairing'
    make: *** [pairing-install] Error 2

    Why does this happen?
    I'm a green hand with linux.
    Thanks a lot!
    Last edited by gigigou; 05-16-2012, 12:27 AM.

  • #2
    Corona is old, forget it! Superseded by Bioscope then Lifescope.

    Have a look at the SOLiD application forum on this site for aligner discussions, but you could try NovoalignCS (commercial) or Shrimp2 (free).

    Comment


    • #3
      old?
      I'm just beginning with it, then it is said to be old...
      I'll try the Shrimp.
      But still wish somebody can help me with corona.
      Originally posted by colindaven View Post
      Corona is old, forget it! Superseded by Bioscope then Lifescope.

      Have a look at the SOLiD application forum on this site for aligner discussions, but you could try NovoalignCS (commercial) or Shrimp2 (free).
      Last edited by gigigou; 05-16-2012, 04:58 PM.

      Comment

      Latest Articles

      Collapse

      • seqadmin
        Genetic Variation in Immunogenetics and Antibody Diversity
        by seqadmin



        The field of immunogenetics explores how genetic variations influence immune responses and susceptibility to disease. In a recent SEQanswers webinar, Oscar Rodriguez, Ph.D., Postdoctoral Researcher at the University of Louisville, and Ruben Martínez Barricarte, Ph.D., Assistant Professor of Medicine at Vanderbilt University, shared recent advancements in immunogenetics. This article discusses their research on genetic variation in antibody loci, antibody production processes,...
        11-06-2024, 07:24 PM
      • seqadmin
        Choosing Between NGS and qPCR
        by seqadmin



        Next-generation sequencing (NGS) and quantitative polymerase chain reaction (qPCR) are essential techniques for investigating the genome, transcriptome, and epigenome. In many cases, choosing the appropriate technique is straightforward, but in others, it can be more challenging to determine the most effective option. A simple distinction is that smaller, more focused projects are typically better suited for qPCR, while larger, more complex datasets benefit from NGS. However,...
        10-18-2024, 07:11 AM

      ad_right_rmr

      Collapse

      News

      Collapse

      Topics Statistics Last Post
      Started by seqadmin, Today, 11:09 AM
      0 responses
      22 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, Today, 06:13 AM
      0 responses
      20 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, 11-01-2024, 06:09 AM
      0 responses
      30 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, 10-30-2024, 05:31 AM
      0 responses
      21 views
      0 likes
      Last Post seqadmin  
      Working...
      X