After struggleing with the first two step of quake for one day, finally started the 3rd step, but got the following message:
cmd:
correct -f R1_renamed.fastq R2_renamed.fastq -k 15 -c 3.76 -m R.qcts -p 1 -q 33
Result:
8907980 trusted kmers
AT% = 0.344978
@DJDP4KN1:1:1101:10000:102173#TGACCA/1
CCAGCAGGAAGAGCTTGCCGCGTGCGGTGGGGTCGAGGTGGGTGGCGTATTCGAGGTGGTGTTTTTCCATCACCAGGATGATGTCGGCCCAGCGGCTGAT
+
terminate called after throwing an instance of 'std:ut_of_range'
what(): basic_string::substr
Aborted
Any tips?
Binbin
cmd:
correct -f R1_renamed.fastq R2_renamed.fastq -k 15 -c 3.76 -m R.qcts -p 1 -q 33
Result:
8907980 trusted kmers
AT% = 0.344978
@DJDP4KN1:1:1101:10000:102173#TGACCA/1
CCAGCAGGAAGAGCTTGCCGCGTGCGGTGGGGTCGAGGTGGGTGGCGTATTCGAGGTGGTGTTTTTCCATCACCAGGATGATGTCGGCCCAGCGGCTGAT
+
terminate called after throwing an instance of 'std:ut_of_range'
what(): basic_string::substr
Aborted
Any tips?
Binbin
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