Hi
I have imported .ace files from 454 sequencing into both Geneious and Seqman pro. I want to find SNPs in reads and currently the analysis only highlights insertions and deletions. This is because the reads import with gaps (dashed lines) for every single variation, which means that for my ~6kb sequence I have an 18kb contig. How can I remove these gaps so that the SNP analysis works properly?
I would appreciate any help with this!
Thanks
I have imported .ace files from 454 sequencing into both Geneious and Seqman pro. I want to find SNPs in reads and currently the analysis only highlights insertions and deletions. This is because the reads import with gaps (dashed lines) for every single variation, which means that for my ~6kb sequence I have an 18kb contig. How can I remove these gaps so that the SNP analysis works properly?
I would appreciate any help with this!
Thanks
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