GTF file for reference of human transcriptome

[oxydeepu]

Hi all,

I have the human transcriptome downloaded from unigene. Is there any other resources where you can get the human transcriptome.? I have the fasta file of the transcriptome. how can i make a reference annotation gtf file from the fasta file.?
Please Help.

Best Regards
Deepak

[arvid]

It doesn't make sense to make a GTF file for a transcript fasta file, like yours. You use a GTF file to describe the transcript annotations for a genome fasta file.

I'm not working on human, so other can chime in on good annotation sources.