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  • desmo
    Member
    • Nov 2011
    • 25

    #1

    Download UCSC table with mySql workbench

    Does anyone know how to download tables from ucsc server with mysql workbench?
    Thanks in advance
  • Anandhi
    Junior Member
    • May 2012
    • 2

    #2
    Hello,

    I am working with JAVA api for KEGG database. I am having problem using the method get_pathways_by_genes method as given in the KEGG manual. Has anybody used it?! I am unable to retrieve pathway information from a list of genes.

    Comment

    • GenoMax
      Senior Member
      • Feb 2008
      • 7142

      #3
      This link provides info about how to log in to the public instance of MySQL at UCSC: http://genome.ucsc.edu/FAQ/FAQdownloads.html#download29

      Originally posted by desmo View Post
      Does anyone know how to download tables from ucsc server with mysql workbench?
      Thanks in advance

      Comment

      • GenoMax
        Senior Member
        • Feb 2008
        • 7142

        #4
        You should post this as a separate message since this is not related the parent question.

        Originally posted by Anandhi View Post
        Hello,

        I am working with JAVA api for KEGG database. I am having problem using the method get_pathways_by_genes method as given in the KEGG manual. Has anybody used it?! I am unable to retrieve pathway information from a list of genes.

        Comment

        • desmo
          Member
          • Nov 2011
          • 25

          #5
          Thanks. I got it!

          Comment

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