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  • baohua100
    Senior Member
    • Jun 2008
    • 103

    maq map -H file

    maq map -H

    -H FILE dump multiple/all 01-mismatch hits to FILE [null]

    But I could not open the output file maybe it's binary ?
  • jnfass
    Member
    • Aug 2008
    • 88

    #2
    yes - it's gzipped ...
    (it really should say this on the man page, shouldn't it?)

    Comment

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