CEAS gives incomplete result

[eilosei]

Hi All,

I wish to usea CEAS to annotate the ChIP-seq peaks called from MACS. The command is:

ceas --name=file.ceas -g ../RefGenome/mm9.refGene -b file.macs_peaks.bed -w file.macs.wig.gz

But here came an error message:

Traceback (most recent call last):
File "/usr/local/bin/ceas", line 1343, in <module>
main()
File "/usr/local/bin/ceas", line 247, in main
if chrom=='' and chrom!=newchrom:
UnboundLocalError: local variable 'newchrom' referenced before assignment

The program still generated a .xls file and a .r file. But the .r file only draw first three pages of figures. So I suspect the .xls file is also not a complete annotation list.

Could anyone help me to solve the problem?!

[Liy]

Same problem, could you figure it out?

L