Unconfigured Ad

Collapse
X
Collapse
 
  • Page of 1
  • Time
  • Show
Clear All
new posts
Previous template Next
  • adurasiwam3
    Member
    • Apr 2012
    • 12
    #1

    Personal Genome Constructor (vcf2diploid tool) - HELP

    Hi everyone,

    I'm trying to use this tool from the Gernstein Lab (http://sv.gersteinlab.org/) to build a genome and insert CNVs for comparison with a reference genome.

    However, the manual is not very easy to understand. Can anyone that has used this tool post the basic steps of what to do? It would be much appreciated.

    Thank you
    Tags: None
    • albireo
      Member
      • Sep 2012
      • 39
      #2
      Hi, is anyone able to answer the original question? I would also be interested in using this tool. Unfortunately, the authors have not been very helpful when asked to help.

        Comment

        • upendra_35
          Senior Member
          • Apr 2010
          • 102
          #3
          Hi, Did you figure out how to use the tool. I am having hard time to use it as well...

            Comment

            Previous template Next

            Latest Articles

            Collapse
            • SEQadmin2
              Multiomic Liquid Biopsy: What DNA/RNA Panels Reveal That DNA Alone Can’t
              by SEQadmin2



              Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?

              Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating              ...
              10-14-2026, 09:55 AM
            • SEQadmin2
              New Genomics Technologies Take Aim at Long-Standing Limits
              by SEQadmin2


              Researchers using sequencing and genomics tools often have to make trade-offs. They can choose between speed or scale, short reads or long-range information, or targeted panels or a view of the whole transcriptome. New technologies that have been released this year are built to address those tough choices.

              We asked six companies the same four questions to learn about their latest products. The new technologies bring a lot to the table, including rethinking sequencing              ...
              09-28-2026, 10:25 AM
            View All

            ad_right_rmr

            Collapse

            News

            Collapse
            Topics Statistics Last Post
            Exeter-Led Study Maps What an Average Human Genome Looks Like by SEQadmin2
            Started by SEQadmin2, 10-22-2026, 11:13 AM
            0 responses
            27 views
            0 reactions
            		 Last Post SEQadmin2
            by SEQadmin2
            10-22-2026, 11:13 AM  
            Long-Read Sequencing Uncovers Cancer Mutations Conventional Testing Missed by SEQadmin2
            Started by SEQadmin2, 10-22-2026, 10:48 AM
            0 responses
            20 views
            0 reactions
            		 Last Post SEQadmin2
            by SEQadmin2
            10-22-2026, 10:48 AM  
            Mayo Clinic-Led Study Detects DNA Mutations Across Noncancerous Tissues by SEQadmin2
            Started by SEQadmin2, 10-15-2026, 10:52 AM
            0 responses
            36 views
            0 reactions
            		 Last Post SEQadmin2
            by SEQadmin2
            10-15-2026, 10:52 AM  
            Study Finds Chromatin Motion Holds Steady Until Cells Face Stress by SEQadmin2
            Started by SEQadmin2, 10-14-2026, 05:39 AM
            0 responses
            43 views
            0 reactions
            		 Last Post SEQadmin2
            by SEQadmin2
            10-14-2026, 05:39 AM  
            View All
            Working...