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  • Genomics101
    Member
    • May 2012
    • 60
    #1

    How do you "database" your results?

    Questions:
    • How did you make a relational database for you genomic information/analysis results?
    • How long did it take you to design and implement?
    • Could someone comfortable with programming but without much experience do it, or does it require a pro?

    After just a few months of NGS analysis, I am swimming in results: GFF files with all the information/annotations about the reference genomes, VCF files of indels and SNPs, snpEff-annotated VCF results, SMART annotated protein sequence results. But these are all flat files. I believe, at this point, a relational database is needed.
    Tags: beginner, databases, newbie, programming
  • xied75
    Senior Member
    • Feb 2012
    • 129
    #2
    That's a VERY GOOD question indeed. I don't have the answer yet as I'm trying to design one.

    Comment

    • shyam_la
      Member
      • Mar 2012
      • 97
      #3
      I am looking for an answer too..

      Comment

      • tayebwajb
        Junior Member
        • Aug 2010
        • 2
        #4
        I will need an answer to this question soon!

        Comment

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