Originally posted by chadn737
View Post
-
I have many chromosomal sequences (not only for Human or hg19/18). I have to do it for all. I don't think for all I can get prebuilt indexes. Another point is that for some cases I have to include/exclude sex related chromosomal sequence. -
Genomic Sequence Database vs Chromosomal sequence database ?
I am doing some experiment with BowTie 1. Now, I want to give BowTie the whole human genomic database as input. However, I have 22 chromosomal sequence database (non sex related) of forward strand. Can anyone help me, is concatenation of those 22 databases is same to whole genomic sequence or not. Means, is CAT 22 chromosomal sequence database == Whole Genomic Sequence database (non sex related) or not.
-
The complexity of cancer is clearly demonstrated in the diverse ecosystem of the tumor microenvironment (TME). The TME is made up of numerous cell types and its development begins with the changes that happen during oncogenesis. “Genomic mutations, copy number changes, epigenetic alterations, and alternative gene expression occur to varying degrees within the affected tumor cells,” explained Andrea O’Hara, Ph.D., Strategic Technical Specialist at Azenta. “As...07-08-2024, 03:19 PM
Leave a comment: