Local UCSC genome browser server

You are currently viewing the SEQanswers forums as a guest, which limits your access. Click here to register now, and join the discussion

baohua100

Senior Member

Join Date: Jun 2008

Posts: 103
- Share
- Tweet
#1

Local UCSC genome browser server

08-16-2009, 10:45 AM

We have some wig files (solexa mapping results).

The reference genome is Poplar (Populus). The UCSC does not provide this genome. We have genome sequence and GFF file.

Can we set up a local server to view the wig files and poplar genome?

Last edited by baohua100; 08-16-2009, 05:26 PM.
Tags: None
ohofmann

Member

Join Date: Jan 2009

Posts: 37
- Share
- Tweet
#2

08-16-2009, 03:10 PM

Isn't UCSC a bit overkill, particularly when it won't provide you with feature tracks anyhow? What's wrong with a standalone viewer?
Comment

Previous template Next

Topics	Statistics	Last Post
A New Method Makes Hantavirus Genome Analysis Faster and More Accessible by SEQadmin2 Started by SEQadmin2, Yesterday, 10:09 AM	0 responses 10 views 0 reactions	Last Post by SEQadmin2 Yesterday, 10:09 AM
A New Single-Cell Method Maps DNA-Protein Interactions by SEQadmin2 Started by SEQadmin2, 06-04-2026, 08:59 AM	0 responses 19 views 0 reactions	Last Post by SEQadmin2 06-04-2026, 08:59 AM
Long-Read RNA Sequencing Uncovers a Hidden Layer of Immune Cell Regulation by SEQadmin2 Started by SEQadmin2, 06-02-2026, 12:03 PM	0 responses 27 views 0 reactions	Last Post by SEQadmin2 06-02-2026, 12:03 PM
DNA Methylation Study Reveals How Epigenetic Changes Pass Between Generations by SEQadmin2 Started by SEQadmin2, 06-02-2026, 11:40 AM	0 responses 21 views 0 reactions	Last Post by SEQadmin2 06-02-2026, 11:40 AM

Working...

Unconfigured Ad